Cross sytsem sources can't run with debugger

[Perkin]

I'm using Xubuntu 11.04, PB4.6 (I know rc2 had problem as well)

I'm trying to run several sources saved from Windows version of PB, but everytime have problems - can not run with internal debugger, or if external, can't execute code.

To get them working, I have to close the file, open the source in a text editor and remove the compiler comments/details at bottom of file, then re-save file.
When I now try loading and compiling file, it does compile properly and runs with debugger.

I'm trying to update some projects so they're cross-platform compilable using same source, and this is a major hassle, as I can't edit them on windows and get it working and then boot into linux and use same updated sources (without the hassle of workaround) and simply re-compile and run.

Can anyone else try this out, and if confirmed, I'll do a bug-report.