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Does the problem only occur with a specific source code, or always?

Mixed 32bit and 64bit libraries?

I have version 5.11 and 5.43 installed on RHEL6 server because 5.43 cannot send mails to an exchange server.

lrwxrwxrwx. 1 root root 22 Oct 13 2016 purebasic -> purebasic_5_43_x64_LTS
drwxr-xr ...

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PureBasic 5.11 (Linux - x86)
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Loading external modules...
Starting compilation...
Including source: LogMsg.pbi
256 lines processed.
Creating the executable.
Error: Linker
purebasic.o: could not read symbols: File ...